CDS

Accession Number TCMCG007C30815
gbkey CDS
Protein Id XP_009143761.2
Location join(5646023..5646141,5646299..5647256)
Gene LOC103867438
GeneID 103867438
Organism Brassica rapa

Protein

Length 358aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009145513.3
Definition tRNA (carboxymethyluridine(34)-5-O)-methyltransferase [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category Q
Description Methyltransferase domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K10770        [VIEW IN KEGG]
EC 2.1.1.229        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0002097        [VIEW IN EMBL-EBI]
GO:0002098        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005506        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008175        [VIEW IN EMBL-EBI]
GO:0008198        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016300        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016705        [VIEW IN EMBL-EBI]
GO:0016706        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0051213        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATATATTTTATCTCTTTAATAAAAAACCCTAAATCAACCTTCGGTTTCAGATCACCAACCAGTCCAGTCCAATCCACTCACCATCTCGCCTCGCCTCGCCGTTTCTTCTTGAATCCCTCGCGTACAATGAGAGACGTCAAAGTCAAAGCTAATCCAAAGTCAACGCATCAAGAAGACTCCCCGAGCGTCAAATCAACACCCGAGATCGAGAAAAAGTACGTCCACCGAGTCTACGACGCCATCGCTCCGCACTTCAGCTCCACGAGGTACGCCAAGTGGCCTAGAGTCGCCGCCTTCCTCGAATCCTTACCTTCCGGATCCGTGATCCTCGACGCCGGCTGCGGGAACGGCAAGTACCTGGGGCTGAACCCGAACTGTTTCTTTATAGGCTGCGACATAAGCAGCCCTCTCATCAGAATCTGTTCGGAGAAAGGGCAAGAGGTTGTAGTCGCGGACGCTGTTAATCTCCCTTACAGAGAAGGGTTTGGCGACGCGGCGATCTCGATCGCGGTTTTGCATCATTTGAGTACGGAGGAGAGAAGGACGAGCGCTGTTAACGAGCTGGTTCGGGTTGTTAAGCCTGGCGGGTTTGTGTTAATAACGGTTTGGGCTGCGGAGCAGGAGGATGAGTCTTTGCTTACTAAGTGGACGCCGTTGTCTCCCAAGTATGTTGAGGAATGGGTGGGACCGGGTAGTCCGATGGATAGCCCTCGTGTGAGGAACAATCCGTGCTTCGGTCTTGAGAGTATTCCGGAGAGTGACGTGAGTGTAAAGGAGGAAAAGGATAAGGACTCTGTGGAGATGAGTCATCAGCAAGAGTACTTTGTTCCGTGGCATTTGCCGTACCACCGTGCGGAAGTTAGTGGTGCATCTGCTTCTGCGCTTGCGAGTGGGCTTGCGAAAAAAGACGATAAGAAAGGAGCTGTTGTGTACAATAGATACTACCATGTGTTCAGTGAAGGGGAGCTTGAAAGGTTGGCGTCTGGTGTAGGGAATGCAATGGTAGTTGATAGGTTTTACGATAAGTCTAATTGGTGTATTGTTCTTCAGAAAGAAGCTTTAAACCAAGGCTGA
Protein:  
MIYFISLIKNPKSTFGFRSPTSPVQSTHHLASPRRFFLNPSRTMRDVKVKANPKSTHQEDSPSVKSTPEIEKKYVHRVYDAIAPHFSSTRYAKWPRVAAFLESLPSGSVILDAGCGNGKYLGLNPNCFFIGCDISSPLIRICSEKGQEVVVADAVNLPYREGFGDAAISIAVLHHLSTEERRTSAVNELVRVVKPGGFVLITVWAAEQEDESLLTKWTPLSPKYVEEWVGPGSPMDSPRVRNNPCFGLESIPESDVSVKEEKDKDSVEMSHQQEYFVPWHLPYHRAEVSGASASALASGLAKKDDKKGAVVYNRYYHVFSEGELERLASGVGNAMVVDRFYDKSNWCIVLQKEALNQG